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Gene: Caly (calcyon neuron-specific vesicular protein) Rattus norvegicus
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Symbol: Caly
Name: calcyon neuron-specific vesicular protein
Description: Predicted to have cargo receptor activity and clathrin light chain binding activity. Predicted to be involved in several processes, including clathrin coat assembly; positive regulation of endocytosis; and postsynaptic neurotransmitter receptor internalization. Predicted to localize to several cellular components, including the endosome; glutamatergic synapse; and postsynaptic endocytic zone. Orthologous to human CALY (calcyon neuron specific vesicular protein); INTERACTS WITH 6-propyl-2-thiouracil; aldehydo-D-glucose; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Calcyon; D1 dopamine receptor-interacting protein; dopamine receptor D1 interacting protein; Drd1ip; neuron-specific vesicular protein calcyon
Orthologs:
Homo sapiens (human) : CALY (calcyon neuron specific vesicular protein)  HGNC  Alliance
Mus musculus (house mouse) : Caly (calcyon neuron-specific vesicular protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Caly (calcyon neuron specific vesicular protein)
Pan paniscus (bonobo/pygmy chimpanzee) : CALY (calcyon neuron specific vesicular protein)
Canis lupus familiaris (dog) : CALY (calcyon neuron specific vesicular protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Caly (calcyon neuron specific vesicular protein)
Sus scrofa (pig) : CALY (calcyon neuron specific vesicular protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01212,537,851 - 212,549,040 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01219,452,501 - 219,463,690 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41199,869,223 - 199,880,102 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11200,019,215 - 200,030,094 (-)NCBI
Celera1192,539,864 - 192,551,053 (-)NCBICelera
Cytogenetic Map1q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Caly
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621719
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.