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Gene: Atxn10 (ataxin 10) Rattus norvegicus
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Symbol: Atxn10
Name: ataxin 10
Description: Exhibits enzyme binding activity and identical protein binding activity. Involved in protein homotrimerization. Localizes to the cytosol. Human ortholog(s) of this gene implicated in hereditary ataxia and spinocerebellar ataxia type 10. Orthologous to human ATXN10 (ataxin 10); INTERACTS WITH 2,6-dinitrotoluene; ammonium chloride; beta-naphthoflavone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ataxin 10 homolog; ataxin 10 homolog (human); ataxin-10; neuronal beta-catenin-like protein; Sca10; spinocerebellar ataxia 10 homolog; spinocerebellar ataxia 10 homolog (human); spinocerebellar ataxia type 10 protein homolog
Orthologs:
Homo sapiens (human) : ATXN10 (ataxin 10)  HGNC  Alliance
Mus musculus (house mouse) : Atxn10 (ataxin 10)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atxn10 (ataxin 10)
Pan paniscus (bonobo/pygmy chimpanzee) : ATXN10 (ataxin 10)
Canis lupus familiaris (dog) : ATXN10 (ataxin 10)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atxn10 (ataxin 10)
Sus scrofa (pig) : ATXN10 (ataxin 10)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07126,228,416 - 126,351,728 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07125,942,296 - 126,065,030 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47123,338,625 - 123,461,768 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17123,372,764 - 123,495,995 (+)NCBI
Celera7112,739,769 - 112,861,083 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atxn10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621813
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.