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Gene: Khsrp (KH-type splicing regulatory protein) Rattus norvegicus
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Symbol: Khsrp
Name: KH-type splicing regulatory protein
CRRD ID: 621828
Description: Exhibits mRNA 3'-UTR binding activity. Predicted to be involved in several processes, including RNA metabolic process; negative regulation of cellular biosynthetic process; and negative regulation of low-density lipoprotein particle clearance. Localizes to dendrite; neuronal cell body; and nucleus. Orthologous to human KHSRP (KH-type splicing regulatory protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; adenine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: far upstream element-binding protein 2; FUSE-binding protein 2; KH type-splicing regulatory protein; KSRP; MAP2 RNA trans-acting protein 1; MAP2 RNA trans-acting protein MARTA1; Marta1
Orthologs:
Homo sapiens (human) : KHSRP (KH-type splicing regulatory protein)  HGNC  Alliance
Mus musculus (house mouse) : Khsrp (KH-type splicing regulatory protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Khsrp (KH-type splicing regulatory protein)
Pan paniscus (bonobo/pygmy chimpanzee) : KHSRP (KH-type splicing regulatory protein)
Canis lupus familiaris (dog) : KHSRP (KH-type splicing regulatory protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Khsrp (KH-type splicing regulatory protein)
Sus scrofa (pig) : KHSRP (KH-type splicing regulatory protein)
Chlorocebus sabaeus (African green monkey) : KHSRP (KH-type splicing regulatory protein)
Heterocephalus glaber (naked mole-rat) : Khsrp (KH-type splicing regulatory protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0910,013,795 - 10,023,670 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,013,854 - 10,022,924 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,014,455 - 9,024,320 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera96,645,132 - 6,654,110 (+)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Khsrp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621828
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.