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Gene: Hopx (HOP homeobox) Rattus norvegicus
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Symbol: Hopx
Name: HOP homeobox
Description: Predicted to have DNA binding activity. Predicted to be involved in several processes, including chaperone-mediated protein complex assembly; positive regulation of skeletal muscle tissue regeneration; and trophectodermal cell differentiation. Predicted to localize to the nucleus. Orthologous to human HOPX (HOP homeobox); INTERACTS WITH (RS)-amphetamine; 1-naphthyl isothiocyanate; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GIIg15b; global ischemia induced protein GIIG15B; global ischemia-induced gene 15B protein; global ischemia-induced protein 15B; Hod; homeobox only domain; homeodomain-only protein; Obl; odd homeobox 1; odd homeobox protein 1
Orthologs:
Homo sapiens (human) : HOPX (HOP homeobox)  HGNC  Alliance
Mus musculus (house mouse) : Hopx (HOP homeobox)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hopx (HOP homeobox)
Pan paniscus (bonobo/pygmy chimpanzee) : HOPX (HOP homeobox)
Canis lupus familiaris (dog) : HOPX (HOP homeobox)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hopx (HOP homeobox)
Sus scrofa (pig) : HOPX (HOP homeobox)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01433,354,803 - 33,362,547 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01433,145,793 - 33,153,537 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41433,369,052 - 33,377,948 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11433,369,055 - 33,377,945 (+)NCBI
Celera1430,388,376 - 30,396,113 (+)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hopx
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621841
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.