Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tnnt1 (troponin T1, slow skeletal type) Rattus norvegicus
Analyze
Symbol: Tnnt1
Name: troponin T1, slow skeletal type
Description: Exhibits troponin T binding activity. Predicted to contribute to calcium-dependent ATPase activity and tropomyosin binding activity. Involved in regulation of muscle contraction and slow-twitch skeletal muscle fiber contraction. Localizes to the troponin complex. Human ortholog(s) of this gene implicated in nemaline myopathy 5. Orthologous to human TNNT1 (troponin T1, slow skeletal type); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; INTERACTS WITH ammonium chloride; bisphenol A; lead diacetate.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Fang2; slow skeletal muscle troponin T; sTnT; tnTs; troponin T type 1 (skeletal, slow); troponin T, slow skeletal muscle; troponin T1, skeletal, slow
Orthologs:
Homo sapiens (human) : TNNT1 (troponin T1, slow skeletal type)  HGNC  Alliance
Mus musculus (house mouse) : Tnnt1 (troponin T1, skeletal, slow)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnnt1 (troponin T1, slow skeletal type)
Pan paniscus (bonobo/pygmy chimpanzee) : TNNT1 (troponin T1, slow skeletal type)
Canis lupus familiaris (dog) : TNNT1 (troponin T1, slow skeletal type)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnnt1 (troponin T1, slow skeletal type)
Sus scrofa (pig) : TNNT1 (troponin T1, slow skeletal type)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0172,889,270 - 72,899,629 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0175,652,123 - 75,662,339 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4168,036,411 - 68,045,142 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1168,114,521 - 68,123,253 (+)NCBI
Celera167,811,420 - 67,821,558 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tnnt1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621852
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.