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Gene: Syt13 (synaptotagmin 13) Rattus norvegicus
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Symbol: Syt13
Name: synaptotagmin 13
Description: Predicted to have several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in several processes, including calcium-ion regulated exocytosis; cellular response to calcium ion; and regulation of secretion by cell. Predicted to localize to several cellular components, including axon; exocytic vesicle; and integral component of plasma membrane. Orthologous to human SYT13 (synaptotagmin 13); INTERACTS WITH ammonium chloride; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: synaptotagmin XIII; synaptotagmin-13; sytXIII
Orthologs:
Homo sapiens (human) : SYT13 (synaptotagmin 13)  HGNC  Alliance
Mus musculus (house mouse) : Syt13 (synaptotagmin XIII)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syt13 (synaptotagmin 13)
Pan paniscus (bonobo/pygmy chimpanzee) : SYT13 (synaptotagmin 13)
Canis lupus familiaris (dog) : SYT13 (synaptotagmin 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syt13 (synaptotagmin 13)
Sus scrofa (pig) : SYT13 (synaptotagmin 13)
Chlorocebus sabaeus (African green monkey) : SYT13 (synaptotagmin 13)
Heterocephalus glaber (naked mole-rat) : Syt13 (synaptotagmin 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0381,814,287 - 81,852,454 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl381,814,261 - 81,854,605 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0388,516,996 - 88,555,163 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4377,317,878 - 77,356,047 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1377,214,229 - 77,252,539 (+)NCBI
Celera378,081,337 - 78,119,548 (+)NCBICelera
Cytogenetic Map3q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Syt13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621877
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.