Gene: Podxl (podocalyxin-like) Rattus norvegicus
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Symbol: Podxl
Name: podocalyxin-like
Description: Involved in glomerular visceral epithelial cell development and negative regulation of cell adhesion; localizes to the apical plasma membrane, cell body, and slit diaphragm; orthologous to human PODXL (podocalyxin like); INTERACTS WITH 17alpha-ethynylestradiol; 2,2,2-tetramine; 3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: PC; PCLP-1; podocalyxin; podocalyxin-like protein 1
Orthologs:
Homo sapiens (human) : PODXL (podocalyxin like)  HGNC  Alliance
Mus musculus (house mouse) : Podxl (podocalyxin-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Podxl (podocalyxin like)
Pan paniscus (bonobo/pygmy chimpanzee) : PODXL (podocalyxin like)
Canis lupus familiaris (dog) : PODXL (podocalyxin like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Podxl (podocalyxin like)
Sus scrofa (pig) : PODXL (podocalyxin like)
more info ...
Allele / Splice: Podxlm1Mcwi  
Genetic Models: SS-Podxlm1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0458,829,049 - 58,893,353 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0458,581,513 - 58,645,671 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4458,611,904 - 58,658,598 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1458,888,035 - 58,934,728 (-)NCBI
Celera455,224,910 - 55,271,542 (-)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Podxl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621878
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.