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Gene: Scarb2 (scavenger receptor class B, member 2) Rattus norvegicus
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Symbol: Scarb2
Name: scavenger receptor class B, member 2
Description: Predicted to have several functions, including chaperone binding activity; cholesterol binding activity; and phospholipid binding activity. Involved in positive regulation of neuron projection development. Predicted to localize to the endocytic vesicle membrane; lysosome; and plasma membrane. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy. Orthologous to human SCARB2 (scavenger receptor class B member 2); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 85 kDa lysosomal membrane sialoglycoprotein; CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 2; CD36 antigen-like 2; Cd36l2; LGP85; LIMP II; LimpII; lysosome membrane protein 2; lysosome membrane protein II; scavenger receptor class B member 2
Orthologs:
Homo sapiens (human) : SCARB2 (scavenger receptor class B member 2)  HGNC  Alliance
Mus musculus (house mouse) : Scarb2 (scavenger receptor class B, member 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scarb2 (scavenger receptor class B member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SCARB2 (scavenger receptor class B member 2)
Canis lupus familiaris (dog) : SCARB2 (scavenger receptor class B member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scarb2 (scavenger receptor class B member 2)
Sus scrofa (pig) : SCARB2 (scavenger receptor class B member 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01417,064,173 - 17,115,620 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1417,064,353 - 17,115,963 (+)Ensembl
Rnor_5.01416,980,270 - 17,031,712 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41417,119,366 - 17,170,850 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11417,119,365 - 17,170,850 (+)NCBI
Celera1414,952,893 - 15,004,293 (+)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Scarb2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 621882
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.