Gene: Sclt1 (sodium channel and clathrin linker 1) Rattus norvegicus
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Symbol: Sclt1
Name: sodium channel and clathrin linker 1
Description: Exhibits clathrin binding activity, protein C-terminus binding activity, and sodium channel regulator activity; involved in clustering of voltage-gated sodium channels; localizes to the clathrin complex; orthologous to human SCLT1 (sodium channel and clathrin linker 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2,5-hexanedione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CAP-1A; clathrin-associated protein 1A; Sap1; sodium channel associated protein 1; sodium channel Nav1.8-binding protein; sodium channel-associated protein 1
Orthologs:
Homo sapiens (human) : SCLT1 (sodium channel and clathrin linker 1)  HGNC  Alliance
Mus musculus (house mouse) : Sclt1 (sodium channel and clathrin linker 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sclt1 (sodium channel and clathrin linker 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SCLT1 (sodium channel and clathrin linker 1)
Canis lupus familiaris (dog) : SCLT1 (sodium channel and clathrin linker 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sclt1 (sodium channel and clathrin linker 1)
Sus scrofa (pig) : SCLT1 (sodium channel and clathrin linker 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02128,523,376 - 128,675,668 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02148,123,547 - 148,271,670 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42128,562,358 - 128,732,751 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12128,512,276 - 128,682,668 (-)NCBI
Celera2119,508,286 - 119,664,824 (-)NCBICelera
Cytogenetic Map2q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sclt1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 628721
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.