Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Msi1 (musashi RNA-binding protein 1) Rattus norvegicus
Analyze
Symbol: Msi1
Name: musashi RNA-binding protein 1
Description: Predicted to have identical protein binding activity and poly(U) RNA binding activity. Involved in epithelial cell differentiation and response to hormone. Predicted to localize to the cytoplasm; nucleus; and polysome. Biomarker of brain infarction and brain ischemia. Orthologous to human MSI1 (musashi RNA binding protein 1); PARTICIPATES IN mRNA decay pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Msi1h; Musashi homolog 1(Drosophila); musashi-1; RNA-binding protein Musashi homolog 1
Orthologs:
Homo sapiens (human) : MSI1 (musashi RNA binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Msi1 (musashi RNA-binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Msi1 (musashi RNA binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : MSI1 (musashi RNA binding protein 1)
Canis lupus familiaris (dog) : MSI1 (musashi RNA binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Msi1 (musashi RNA binding protein 1)
Sus scrofa (pig) : MSI1 (musashi RNA binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01246,899,835 - 46,935,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1246,895,447 - 46,920,952 (-)Ensembl
Rnor_5.01248,696,700 - 48,731,989 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41242,425,957 - 42,462,517 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11242,289,344 - 42,310,487 (-)NCBI
Celera1242,786,001 - 42,821,164 (-)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Msi1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 628778
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.