Gene: Cthrc1 (collagen triple helix repeat containing 1) Rattus norvegicus
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Symbol: Cthrc1
Name: collagen triple helix repeat containing 1
Description: Predicted to have Wnt-protein binding activity and frizzled binding activity; involved in cell migration; localizes to the extracellular matrix; orthologous to human CTHRC1 (collagen triple helix repeat containing 1); PARTICIPATES IN Wnt signaling, non-canonical pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: collagen triple helix repeat-containing protein 1
Orthologs:
Homo sapiens (human) : CTHRC1 (collagen triple helix repeat containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Cthrc1 (collagen triple helix repeat containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cthrc1 (collagen triple helix repeat containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CTHRC1 (collagen triple helix repeat containing 1)
Canis lupus familiaris (dog) : CTHRC1 (collagen triple helix repeat containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cthrc1 (collagen triple helix repeat containing 1)
Sus scrofa (pig) : CTHRC1 (collagen triple helix repeat containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0777,966,722 - 77,977,004 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0778,271,770 - 78,282,052 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4774,630,044 - 74,640,324 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1774,650,773 - 74,661,054 (+)NCBI
Celera767,178,934 - 67,189,216 (+)NCBICelera
Cytogenetic Map7q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cthrc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 628801
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.