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Gene: Nr1d1 (nuclear receptor subfamily 1, group D, member 1) Rattus norvegicus
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Symbol: Nr1d1
Name: nuclear receptor subfamily 1, group D, member 1
Description: Exhibits transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including photoperiodism; positive regulation of circadian rhythm; and regulation of hepatic stellate cell activation. Localizes to the cytoplasm; dendrite; and neuronal cell body. Biomarker of hyperthyroidism; hypothyroidism; portal hypertension; and type 2 diabetes mellitus. Orthologous to human NR1D1 (nuclear receptor subfamily 1 group D member 1); INTERACTS WITH (RS)-amphetamine; 1,2,4-trimethylbenzene; 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: EAR-1; nuclear receptor subfamily 1 group D member 1; rev-erb alpha; rev-erbA-alpha; REV-ERBAALPHA; V-erbA-related protein 1; V-erbA-related protein EAR-1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01086,683,875 - 86,690,815 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01086,479,868 - 86,486,808 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41087,541,246 - 87,548,186 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11087,555,629 - 87,560,471 (-)NCBI
Celera1082,476,555 - 82,483,495 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nr1d1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 628827
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.