Gene: Trpv1 (transient receptor potential cation channel, subfamily V, member 1) Rattus norvegicus
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Symbol: Trpv1
Name: transient receptor potential cation channel, subfamily V, member 1
Description: Exhibits several functions, including anion binding activity, calmodulin binding activity, and transmembrane transporter activity; involved in several processes, including calcium ion import across plasma membrane, cellular response to acidic pH, and cellular response to organonitrogen compound; localizes to several cellular components, including the cytoplasm, dendrite, and external side of plasma membrane; used to study myocardial infarction; orthologous to human TRPV1 (transient receptor potential cation channel subfamily V member 1); INTERACTS WITH (R)-camphor; (S)-nicotine; 1,2-Naphthoquinone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: capsaicin receptor; deltaN-TRPV1; osm-9-like TRP channel 1; OTRPC1; transient receptor potential cation channel subfamily V member 1; transient receptor potential vanilloid 1 supraoptic nucleus; TRPV1_SON; vanilloid receptor 1; vanilloid receptor subtype 1; vanilloid receptor type 1 like protein 1; vanilloid receptor type 1-like; vanilloid type 1 receptor; VR.5'sv; Vr1; Vr1l1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01059,799,123 - 59,824,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01059,538,296 - 59,563,441 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41060,109,656 - 60,134,939 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11060,123,278 - 60,148,562 (+)NCBI
Celera1056,974,294 - 56,999,462 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Trpv1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 628841
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-05-14
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.