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Gene: Npas4 (neuronal PAS domain protein 4) Rattus norvegicus
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Symbol: Npas4
Name: neuronal PAS domain protein 4
Description: Exhibits protein heterodimerization activity. Predicted to be involved in several processes, including chemical synaptic transmission; learning or memory; and modulation of chemical synaptic transmission. Predicted to localize to the nucleus and transcription factor complex. Orthologous to human NPAS4 (neuronal PAS domain protein 4); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: bHLH PAS type transcription factor NXF; bHLH-PAS type transcription factor NXF; HLH-PAS transcription factor NXF; neuronal PAS domain-containing protein 4; neuronal PAS4; Nxf
Orthologs:
Homo sapiens (human) : NPAS4 (neuronal PAS domain protein 4)  HGNC  Alliance
Mus musculus (house mouse) : Npas4 (neuronal PAS domain protein 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Npas4 (neuronal PAS domain protein 4)
Pan paniscus (bonobo/pygmy chimpanzee) : NPAS4 (neuronal PAS domain protein 4)
Canis lupus familiaris (dog) : NPAS4 (neuronal PAS domain protein 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Npas4 (neuronal PAS domain protein 4)
Sus scrofa (pig) : NPAS4 (neuronal PAS domain protein 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01220,260,310 - 220,278,177 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01227,191,333 - 227,209,087 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41207,597,735 - 207,602,499 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11207,751,187 - 207,755,952 (-)NCBI
Celera1199,821,938 - 199,826,702 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Npas4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 628866
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.