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Gene: Nptx1 (neuronal pentraxin 1) Rattus norvegicus
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Symbol: Nptx1
Name: neuronal pentraxin 1
Description: Predicted to have metal ion binding activity. Involved in several processes, including mitochondrial fragmentation involved in apoptotic process; neurotransmitter receptor localization to postsynaptic specialization membrane; and regulation of postsynaptic density assembly. Localizes to several cellular components, including the glutamatergic synapse; mitochondrion; and synaptic cleft. Orthologous to human NPTX1 (neuronal pentraxin 1); INTERACTS WITH (S)-colchicine; 1,2,4-trimethylbenzene; 1,3,5-trinitro-1,3,5-triazinane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 47 kDa taipoxin-binding protein; LOC360249; neuronal pentraxin I; neuronal pentraxin-1; NP-I; NP1
Orthologs:
Homo sapiens (human) : NPTX1 (neuronal pentraxin 1)  HGNC  Alliance
Mus musculus (house mouse) : Nptx1 (neuronal pentraxin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nptx1 (neuronal pentraxin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NPTX1 (neuronal pentraxin 1)
Canis lupus familiaris (dog) : NPTX1 (neuronal pentraxin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nptx1 (neuronal pentraxin 1)
Sus scrofa (pig) : NPTX1 (neuronal pentraxin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010108,682,637 - 108,691,592 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010108,286,989 - 108,295,944 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410108,918,661 - 108,927,616 (-)NCBIRGSC3.4rn4RGSC3.4
Celera10103,356,568 - 103,365,489 (-)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nptx1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 628894
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.