Gene: Nup58 (nucleoporin 58) Rattus norvegicus
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Symbol: Nup58
Name: nucleoporin 58
Description: Exhibits nuclear localization sequence binding activity; involved in nucleocytoplasmic transport, protein complex oligomerization, and regulation of protein import into nucleus; localizes to the nuclear pore; orthologous to human NUP58 (nucleoporin 58); PARTICIPATES IN mRNA nuclear export pathway; RNA transport pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 58 kDa nucleoporin; nucleoporin like 1; nucleoporin p45; nucleoporin p58; nucleoporin p58/p45; nucleoporin-like 1; nucleoporin-like protein 1; Nup45; Nupl1; p58/p45
Orthologs:
Homo sapiens (human) : NUP58 (nucleoporin 58)  HGNC  Alliance
Mus musculus (house mouse) : Nupl1 (nucleoporin like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nup58 (nucleoporin 58)
Pan paniscus (bonobo/pygmy chimpanzee) : NUP58 (nucleoporin 58)
Canis lupus familiaris (dog) : NUP58 (nucleoporin 58)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nup58 (nucleoporin 58)
Sus scrofa (pig) : NUP58 (nucleoporin 58)
more info ...
Allele / Splice: Nup58_v2   Nup58_v3   Nup58_v1   Nup58_v4  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01540,496,754 - 40,545,933 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01544,308,883 - 44,358,084 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41539,317,826 - 39,350,075 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11539,332,153 - 39,365,788 (-)NCBI
Celera1534,076,434 - 34,108,683 (-)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nup58
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 631334
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.