Gene: Tlr9 (toll-like receptor 9) Rattus norvegicus
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Symbol: Tlr9
Name: toll-like receptor 9
Description: Exhibits unmethylated CpG binding activity; involved in several processes, including cellular response to lipopolysaccharide, cellular response to metal ion, and defense response to virus; localizes to the plasma membrane; biomarker of mastitis and perinatal necrotizing enterocolitis; orthologous to human TLR9 (toll like receptor 9); PARTICIPATES IN Toll-like receptor signaling pathway; Chagas disease pathway; malaria pathway; INTERACTS WITH (RS)-amphetamine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Orthologs:
Homo sapiens (human) : TLR9 (toll like receptor 9)  HGNC  Alliance
Mus musculus (house mouse) : Tlr9 (toll-like receptor 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tlr9 (toll like receptor 9)
Canis lupus familiaris (dog) : TLR9 (toll like receptor 9)
Sus scrofa (pig) : TLR9 (toll like receptor 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08114,916,122 - 114,920,171 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08114,279,020 - 114,283,069 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera8106,185,754 - 106,189,869 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tlr9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 631352
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.