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Gene: Sharpin (SHANK-associated RH domain interactor) Rattus norvegicus
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Symbol: Sharpin
Name: SHANK-associated RH domain interactor
Description: Exhibits identical protein binding activity. Involved in brain development. Localizes to dendrite and postsynaptic density. Orthologous to human SHARPIN (SHANK associated RH domain interactor); PARTICIPATES IN integrin mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; INTERACTS WITH 2,4-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Conneck1; MGC93373; SHANK-associated RH domain interacting protein; shank-associated RH domain-interacting protein; shank-interacting protein
Orthologs:
Homo sapiens (human) : SHARPIN (SHANK associated RH domain interactor)  HGNC  Alliance
Mus musculus (house mouse) : Sharpin (SHANK-associated RH domain interacting protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sharpin (SHANK associated RH domain interactor)
Pan paniscus (bonobo/pygmy chimpanzee) : SHARPIN (SHANK associated RH domain interactor)
Canis lupus familiaris (dog) : SHARPIN (SHANK associated RH domain interactor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sharpin (SHANK associated RH domain interactor)
Sus scrofa (pig) : SHARPIN (SHANK associated RH domain interactor)
Chlorocebus sabaeus (African green monkey) : SHARPIN (SHANK associated RH domain interactor)
Heterocephalus glaber (naked mole-rat) : Sharpin (SHANK associated RH domain interactor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07117,413,151 - 117,417,455 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7117,413,152 - 117,417,363 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07117,400,781 - 117,404,993 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47114,397,762 - 114,401,974 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17114,431,992 - 114,436,204 (-)NCBI
Celera7104,423,008 - 104,427,220 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Sharpin
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 631353
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.