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Gene: Slc13a5 (solute carrier family 13 member 5) Rattus norvegicus
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Symbol: Slc13a5
Name: solute carrier family 13 member 5
Description: Exhibits citrate transmembrane transporter activity; sodium:dicarboxylate symporter activity; and succinate transmembrane transporter activity. Involved in citrate transport and succinate transport. Localizes to the basolateral plasma membrane. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy 25. Orthologous to human SLC13A5 (solute carrier family 13 member 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3-methylcholanthrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Na(+)/citrate cotransporter; Nact; sodium-coupled citrate transporter; sodium-dependent citrate transporter; solute carrier family 13 (sodium-dependent citrate transporter), member 5
Orthologs:
Homo sapiens (human) : SLC13A5 (solute carrier family 13 member 5)  HGNC  Alliance
Mus musculus (house mouse) : Slc13a5 (solute carrier family 13 (sodium-dependent citrate transporter), member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc13a5 (solute carrier family 13 member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC13A5 (solute carrier family 13 member 5)
Canis lupus familiaris (dog) : SLC13A5 (solute carrier family 13 member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc13a5 (solute carrier family 13 member 5)
Sus scrofa (pig) : SLC13A5 (solute carrier family 13 member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01058,806,581 - 58,835,549 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01058,550,465 - 58,575,859 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41059,133,558 - 59,157,617 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11059,147,180 - 59,171,240 (-)NCBI
Celera1055,995,488 - 56,019,392 (-)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc13a5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 631374
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.