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Gene: Vac14 (VAC14 component of PIKFYVE complex) Rattus norvegicus
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Symbol: Vac14
Name: VAC14 component of PIKFYVE complex
Description: Predicted to be involved in phosphatidylinositol biosynthetic process. Predicted to localize to the PAS complex; endosome membrane; and extrinsic component of vacuolar membrane. Human ortholog(s) of this gene implicated in striatonigral degeneration. Orthologous to human VAC14 (VAC14 component of PIKFYVE complex); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; INTERACTS WITH 2,6-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hydin; VAC14 homolog; Vac14 homolog (S. cerevisiae); Vac14, PIKFYVE complex component; vacuole 14 protein; vacuole 14 protein (S. cerevisiae)
Orthologs:
Homo sapiens (human) : VAC14 (VAC14 component of PIKFYVE complex)  HGNC  Alliance
Mus musculus (house mouse) : Vac14 (Vac14 homolog (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vac14 (VAC14 component of PIKFYVE complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VAC14 (VAC14 component of PIKFYVE complex)
Canis lupus familiaris (dog) : VAC14 (VAC14 component of PIKFYVE complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vac14 (VAC14 component of PIKFYVE complex)
Sus scrofa (pig) : VAC14 (VAC14 component of PIKFYVE complex)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01940,927,007 - 41,029,206 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01951,753,772 - 51,855,971 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41940,538,392 - 40,639,758 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11940,543,272 - 40,644,637 (+)NCBI
Celera1937,985,831 - 38,087,096 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vac14
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 631410
Created: 2003-08-13
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.