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Gene: LOC100912566 (UPF0500 protein C1orf216 homolog) Rattus norvegicus
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Symbol: LOC100912566
Name: UPF0500 protein C1orf216 homolog
Description: Orthologous to human C1orf216 (chromosome 1 open reading frame 216); INTERACTS WITH bisphenol A; 4-hydroxyphenyl retinamide (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Orthologs:
Homo sapiens (human) : C1orf216 (chromosome 1 open reading frame 216)  HGNC  Alliance
Mus musculus (house mouse) : 5730409E04Rik (RIKEN cDNA 5730409E04Rik gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102022042 (chromosome unknown open reading frame, human C1orf216)
Pan paniscus (bonobo/pygmy chimpanzee) : C1H1orf216 (chromosome 1 C1orf216 homolog)
Canis lupus familiaris (dog) : C15H1orf216 (chromosome 15 C1orf216 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH1orf216 (chromosome unknown C1orf216 homolog)
Sus scrofa (pig) : C6H1orf216 (chromosome 6 C1orf216 homolog)
Chlorocebus sabaeus (African green monkey) : C20H1orf216 (chromosome 20 open reading frame, human C1orf216)
Heterocephalus glaber (naked mole-rat) : CUNH1orf216 (chromosome unknown C1orf216 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05146,320,693 - 146,342,159 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5146,337,491 - 146,342,154 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05150,063,306 - 150,084,718 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC100912566
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6486286
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.