Gene: Tcaf2 (TRPM8 channel-associated factor 2) Rattus norvegicus
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Symbol: Tcaf2
Name: TRPM8 channel-associated factor 2
Description: Predicted to have ion channel binding activity; predicted to be involved in several processes, including hematopoietic progenitor cell differentiation, negative regulation of anion channel activity, and positive regulation of cell migration; predicted to localize to the cell junction and plasma membrane; orthologous to human TCAF2 (TRPM8 channel associated factor 2); INTERACTS WITH (+)-catechin (ortholog); (-)-epigallocatechin 3-gallate (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100912372; LOC100912416; protein FAM115C-like; TRPM8 channel-associated factor 2-like
Orthologs:
Homo sapiens (human) : TCAF2 (TRPM8 channel associated factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Tcaf2 (TRPM8 channel-associated factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcaf2 (TRPM8 channel associated factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TCAF2 (TRPM8 channel associated factor 2)
Canis lupus familiaris (dog) : TCAF2 (TRPM8 channel associated factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcaf2 (TRPM8 channel associated factor 2)
Sus scrofa (pig) : LOC110257570 (TRPM8 channel-associated factor 2-like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0471,177,974 - 71,196,286 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04135,970,128 - 135,988,378 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map4q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tcaf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6487302
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.