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Gene: Hoxc11 (homeobox C11) Rattus norvegicus
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Symbol: Hoxc11
Name: homeobox C11
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in several processes, including embryonic morphogenesis; organ induction; and regionalization. Predicted to localize to the cytosol and nucleoplasm. Orthologous to human HOXC11 (homeobox C11); INTERACTS WITH (+)-catechin (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2-hydroxypropanoic acid (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeobox protein Hox-C11; homeobox protein Hox-C11-like; LOC100911859; RGD1305450
Orthologs:
Homo sapiens (human) : HOXC11 (homeobox C11)  HGNC  Alliance
Mus musculus (house mouse) : Hoxc11 (homeobox C11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxc11 (homeobox C11)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXC11 (homeobox C11)
Canis lupus familiaris (dog) : HOXC11 (homeobox C11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxc11 (homeobox C11)
Sus scrofa (pig) : HOXC11 (homeobox C11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07144,565,392 - 144,568,580 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07142,356,703 - 142,358,942 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera7130,517,972 - 130,520,959 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxc11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6489991
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.