Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Agbl4 (ATP/GTP binding protein-like 4) Rattus norvegicus
Analyze
Symbol: Agbl4
Name: ATP/GTP binding protein-like 4
Description: Predicted to have metallocarboxypeptidase activity and tubulin binding activity. Predicted to be involved in several processes, including axonal transport of mitochondrion; positive regulation of ubiquitin-dependent protein catabolic process; and protein deglutamylation. Predicted to localize to Golgi apparatus; cytosol; and microtubule organizing center. Orthologous to human AGBL4 (ATP/GTP binding protein like 4); INTERACTS WITH acrylamide; bisphenol A; 1,2-dichloroethane (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Ccp6l1; cytosolic carboxypeptidase 6; cytosolic carboxypeptidase 6-like; cytosolic carboxypeptidase 6-like 1; LOC100911395; RGD1559973; RGD1564161
Orthologs:
Homo sapiens (human) : AGBL4 (ATP/GTP binding protein like 4)  HGNC  Alliance
Mus musculus (house mouse) : Agbl4 (ATP/GTP binding protein-like 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Agbl4 (ATP/GTP binding protein like 4)
Pan paniscus (bonobo/pygmy chimpanzee) : AGBL4 (ATP/GTP binding protein like 4)
Canis lupus familiaris (dog) : AGBL4 (ATP/GTP binding protein like 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101958440 (cytosolic carboxypeptidase 6)
Sus scrofa (pig) : AGBL4 (ATP/GTP binding protein like 4)
Chlorocebus sabaeus (African green monkey) : AGBL4 (ATP/GTP binding protein like 4)
Heterocephalus glaber (naked mole-rat) : Agbl4 (ATP/GTP binding protein like 4)
more info ...
Allele / Splice: Agbl4Tn(sb-T2/Bart3)2.337Mcwi  
Genetic Models: F344-Agbl4Tn(sb-T2/Bart3)2.337Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05130,742,297 - 131,656,581 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.05130,286,393 - 130,305,884 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5131,380,297 - 131,455,211 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl5130,286,393 - 130,305,884 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05134,582,789 - 135,484,937 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5124,065,716 - 124,085,203 (+)NCBICelera
Celera5124,499,912 - 125,235,495 (+)NCBICelera
Cytogenetic Map5q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Agbl4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6493177
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.