Gene: Trim15 (tripartite motif containing 15) Rattus norvegicus
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Symbol: Trim15
Name: tripartite motif containing 15
Description: Predicted to have zinc ion binding activity; predicted to be involved in several processes, including innate immune response, positive regulation of cytokine production, and regulation of viral process; orthologous to human TRIM15 (tripartite motif containing 15); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2,4,6-trinitrobenzenesulfonic acid (ortholog); 3,3',4,4',5-pentachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC100910806; tripartite motif-containing protein 15; tripartite motif-containing protein 15-like
Orthologs:
Homo sapiens (human) : TRIM15 (tripartite motif containing 15)  HGNC  Alliance
Mus musculus (house mouse) : Trim15 (tripartite motif-containing 15)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim15 (tripartite motif containing 15)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM15 (tripartite motif containing 15)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim15 (tripartite motif containing 15)
Sus scrofa (pig) : TRIM15 (tripartite motif containing 15)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0202,194,293 - 2,203,636 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0204,231,049 - 4,240,392 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera202,409,650 - 2,418,993 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim15
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6496746
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.