Prss51 (serine protease 51) - Chinchilla Research Resource Database

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Gene: Prss51 (serine protease 51) Rattus norvegicus

Analyze

General
Array IDs
References

Symbol:

Prss51

Name:

serine protease 51

Description:

Predicted to have serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to localize to the secretory granule.

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

LOC100910401; serine protease 55-like

Orthologs:

Homo sapiens (human) : PRSS51 (serine protease 51) HGNC
Mus musculus (house mouse) : Prss51 (protease, serine 51) MGI Alliance
Canis lupus familiaris (dog) : LOC102151341 (serine protease 55-like)

more info ...

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PRSS51 (serine protease 51)	HGNC	Ensembl
Mus musculus (house mouse):	Prss51 (protease, serine 51)	HGNC	Ensembl
Canis lupus familiaris (dog):	LOC102151341 (serine protease 55-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Prss51 (protease, serine 51)	Alliance	DIOPT (Ensembl Compara, InParanoid, OMA, OrthoFinder, PANTHER)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	15	47,453,206 - 47,459,554 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	47,455,690 - 47,459,742 (+)	Ensembl
Rnor_5.0	15	51,211,488 - 51,215,348 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	15	38,011,914 - 38,018,219 (+)	NCBI		Celera
Cytogenetic Map	15	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation (Toggle Annotation Detail/Summary View)

Disease Annotations

Imported Annotations - ClinVar

Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Neurodevelopmental Disorders		ISO	RGD:6895556	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868

Gene Ontology Annotations

Biological Process

Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
proteolysis		IEA	InterPro:IPR001254	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Cellular Component

Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
secretory granule		IBA	MGI:MGI:3615275 more ...	13792537	PMID:21873635	GO_Central
secretory granule		IBA	MGI:MGI:3615275, PANTHER:PTN000668716	13792537	PMID:21873635	GO_Central

Molecular Function

Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
serine-type endopeptidase activity		IEA	InterPro:IPR001254	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Disease Annotations

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations

Biological Process

proteolysis (IEA)

Cellular Component

secretory granule (IBA)

Molecular Function

serine-type endopeptidase activity (IEA)

References - curated

1.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics

Comparative Map Data

Prss51
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	15	47,453,206 - 47,459,554 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	47,455,690 - 47,459,742 (+)	Ensembl
Rnor_5.0	15	51,211,488 - 51,215,348 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	15	38,011,914 - 38,018,219 (+)	NCBI		Celera
Cytogenetic Map	15	p12	NCBI

PRSS51
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh37	8	10,353,836 - 10,405,089 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	10,391,246 - 10,442,499 (-)	NCBI	NCBI36		hg18	NCBI36
Celera	8	9,480,982 - 9,532,298 (-)	NCBI
Cytogenetic Map	8	p23.1	NCBI
HuRef	8	9,284,362 - 9,335,643 (-)	NCBI		HuRef

Prss51
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm38	14	64,085,525 - 64,097,674 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
MGSCv37	14	64,705,071 - 64,716,507 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	14	64,712,533 - 64,716,509 (+)	NCBI			mm8
Celera	14	61,871,212 - 61,875,201 (+)	NCBI		Celera
Cytogenetic Map	14	D1	NCBI

LOC102151341
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	27,447,669 - 27,459,137 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog Cytomap	25		NCBI

QTLs in Region (Rnor_6.0)

The following QTLs overlap with this region.

CRRD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2298549	Neuinf12	Neuroinflammation QTL 12	3.5		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	15	1	62301382	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2327877	53535766	Rat
10401805	Kidm51	Kidney mass QTL 51			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	15	3881131	48881131	Rat
1582251	Gluco24	Glucose level QTL 24	3.2	0.0008	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	15	10719191	55719191	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	15	15492360	72568189	Rat
5685002	Bss103	Bone structure and strength QTL 103	2.8		tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	15	15828242	60828242	Rat
9590272	Scort14	Serum corticosterone level QTL 14	2.78	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	15	16980907	61980907	Rat
8694427	Bw163	Body weight QTL 163	4.82	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	15	16980907	61980907	Rat
2300167	Bmd63	Bone mineral density QTL 63	5.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	15	17249641	62249641	Rat
2300173	Bmd62	Bone mineral density QTL 62	12.8	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	15	17249641	62249641	Rat
2293688	Bss29	Bone structure and strength QTL 29	5.31	0.0001	femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	15	17249641	62249641	Rat
1331729	Rf42	Renal function QTL 42	3.071		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	15	18093208	81255430	Rat
61424	Scl1	Serum cholesterol level QTL 1	7.7	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	15	18513913	88036354	Rat
2324620	Coatc3	Coat color QTL 3			coat/hair pigmentation trait (VT:0010463)	pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)	15	21021342	52831189	Rat
1578646	Bmd18	Bone mineral density QTL 18	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	15	26381041	106550657	Rat
1578647	Bmd17	Bone mineral density QTL 17	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	15	26381041	106550657	Rat
1578660	Bss19	Bone structure and strength QTL 19	4.3		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	15	26381041	106550657	Rat
10054130	Srcrt8	Stress Responsive Cort QTL 8	2.18	0.0085	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	15	28709741	73709741	Rat
1582214	Stl21	Serum triglyceride level QTL 21	3.1	0.022	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	15	33219101	89640841	Rat
1582227	Gluco30	Glucose level QTL 30	3.6	0.0003	blood glucose amount (VT:0000188)	absolute change in blood glucose level area under curve (CMO:0002034)	15	33219101	89640841	Rat
1582228	Epfw3	Epididymal fat weight QTL 3	4.1	0.0002	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	15	33219101	89640841	Rat
1582242	Gluco28	Glucose level QTL 28	3.3	0.0008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	15	33219101	89640841	Rat
1582244	Bw79	Body weight QTL 79	4	0.0002	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	15	33219101	89640841	Rat
631273	Lecl2	Lens clarity QTL 2		0.001	lens clarity trait (VT:0001304)	age of onset/diagnosis of cataract (CMO:0001584)	15	39480797	62596410	Rat
2293686	Bmd36	Bone mineral density QTL 36	7.4	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	15	39749557	79033707	Rat
2293691	Bmd37	Bone mineral density QTL 37	6.6	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	15	39749557	79033707	Rat
1598828	Glom14	Glomerulus QTL 14	2.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	15	41068094	86068094	Rat
7411725	Strs7	Sensitivity to stroke QTL 7	3.8		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	15	42757241	56027084	Rat
2306968	Anxrr23	Anxiety related response QTL 23	4.83		reflex trait (VT:0001961)	amplitude of the acoustic startle response (CMO:0001520)	15	43097470	52831189	Rat
1300144	Rf23	Renal function QTL 23	3.61		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	15	43097470	106550657	Rat

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	130
Count of miRNA genes:	109
Interacting mature miRNAs:	116
Transcripts:	ENSRNOT00000075276
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	testis	heart	brain	uterus	skeletal muscle tissue	colon	gastrocnemius	lung	spleen	liver	kidney	adrenal gland	thymus
High
Medium	7
Low	1		11	1						4	9
Below cutoff	1	7		3	1	2	5	10	5	8	2	8	6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences

RefSeq Transcripts	XM_003751502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003752825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AABR07018221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01083420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01083421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

XM_003751502 ⟹ XP_003751550

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	47,455,038 - 47,459,554 (+)	NCBI
Rnor_5.0	15	51,211,488 - 51,215,348 (+)	NCBI

Sequence:

show sequence

AGTTGAACCTTGGTCCTCTGCAAGAGCATCAAGTACTCTTAATTGATGAGTCATTGATCTAAGC
CCCAACCCCAACCCTGCACAGTTGTTTAAATGTAGGGTCTCTCACTGCCCTGGCTAGGTTAGGT
TGACTAGCCAGCACGCCCCAAGGATCTGCCTATCTCTGCTTCTCTAGTGCAGGGATTGCAAGCA
TGTGCCACCGTGCACCACCGCTTTCTTTAATGAAATACAGGCTCTAGAGTTGGAACTCCAGCCT
TCGCACTTGCAGGGCAAGCACTTTGCTGACTGAACTATCACTGCAGCCACTCTAGAGCGACCTT
TTAATCTGAGTGGTACATGGCCACCCACTTTATTTCTTCCCCTCCAACCAACTCATAGGGTTGA
AATCACCTATAAAGGCACATGGGACTTTTGAGACCCCACTTCAGAGAATATAAAAACCTCATCC
AGAAATCCAGACTCTTTACTCCAGAGGTAGCAGTAGAAAAAATGACATTTCAAAGTGCTCAGAG
CCACGGGGAGATGATGGTCAGCACAAAGCATCTAGGGTACCCCTTAGACATTAGGCAAAGGGGC
CAATAACCAGGAAGGCCTGGGAGAGAGACTCGGCTCAGTCAGGCTGTGCCTGCTCCTCATATCT
AATCCCAGCACTCACTGTGATGTCACCAGGCTAAACTCTGCCATGCATTTGTGATGCCCAGCTG
TGGCAGCCACAGTTGCTTTTGTATCAATGTGGGCAGGACGTCAAGGAGGGCACCACTGGACTGA
AATGACAACACCATGCTCCCACTTCTAGTTGCACTGCTCATGGCATCTAAAGGACAGGCTCAGG
ATCAGCAAGTTCTGTGTGGCCACAGACCTGCCTTCCCGAACTCATCGTGGCTGCCGTTGAGGGA
GCTGCTTGAAGTCCAGAATGGTGAATTCCCATGGCAAATTAGAACTGGTAGCAGTGAACATCAC
TGTGGTCCTGGGAATCAAGACTTTCAGCGACATCAACTTGGAGAGAAAACTAGTACAGAAGATC
ATCACTCACAAAGACTACAAGCCACCCCACCTTGACAGCGACCTTTGCCTGCTCCTCCTTGCCA
CGCCAATCGAATTCAACAAAGTCAAAATGCCCATCTGCCTGCCACAGAGGGAGAGCACCTGGGA
CAGGTGCTGGATGGCAGAGTGGGCATACGCCCATGGCCATGGTTCAGCCAAAGGCTTAAACATG
CACCTTAAGAAGCTGAGGGTGGTTCAGATTAGCTGGAGGACATGTGCCAAGAGGGTGACTCAGC
TCTCCAGGAACATGCTTTGTGCCTGGAAGGAAGCAGGCACCAACGGCAAGTGCCAGGGAGACAG
CGGGGCACCCATGGTCTGTGCTAACTGGGAGACTCGGAGGCTCTTTCAAGTGGGTGTCTTCAGC
TGGGGCGTAACTTCAGGATCCAGGGGAAGGCCCGGCATGTTTGTGTCTGTGGCTCAGTTTATCC
CATGGATCCTGGAGGAGACACAAAGAGAGGGACGAGCCCTCACCCTCTCAAAAGCCTCAAAAAG
TTTCTTGGCTTGCGGTCCACACTACCATCCCATATTGCTAAGCTTGGGTTCTCAAATACTGCTT
GCTGTCATGTTTGCTGGGGATAAATCAAATTACTAAGCTCTGACTC

hide sequence

RefSeq Acc Id:

XM_003752825 ⟹ XP_003752873

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Celera	15	38,013,701 - 38,018,219 (+)	NCBI

Sequence:

show sequence

AGTTGAACCTTGGTCCTCTGCAAGAGCATCAAGTACTCTTAATTGATGAGTCATTGATCTAAGC
CCCAACCCCAACCCTGCACAGTTGTTTAAATGTAGGGTCTCTCACTGCCCTGGCTAGGTTAGGT
TGACTGGCCAGCACGCCCCAAGGATCTGCCTATCTCTGCTTCTCTAGTGCAGGGATTGCAAGCA
TGTGCCACCGTGCACCACCGCTTTCTTTAATGAAATACAGGCTCTAGAGTTGGAACTCCAGCCT
TCGCACTTGCAGGGCAAGCACTTTGCTGACTGAACTATCACTGCAGCCACTCTAGAGCGACCTT
TTAATCTGAGTGGTACATGGCCACCCACTTTATTTCTTCCCCTCCAACCAACTCATAGGGTTGA
AATCACCTATAAAGGCACATGGGACTTTTGAGACCCCACTTCAGAGAATATAAAAACCTCATCC
AGAAATCCAGACTCTTTACTCCAGAGGTAGCAGTAGAAAAAATGACATTTCAAAGTGCTCAGAG
CCACGGGGAGATGATGGTCAGCACAAAGCATCTAGGGTACCCCTTAGACATTAGGCAAAGGGGC
CAATAACCAGGAAGGCCTGGGAGAGAGACTCGGCTCAGTCAGGCTGTGCCTGCTCCTCATATCT
AATCCCAGCACTCACTGTGATGTCACCAGGCTAAACTCTGCCATGCATTTGTGATGCCCAGCTG
TGGCAGCCACAGTTGCTTTTGTATCAATGTGGGCAGGACGTCAAGGAGGGCACCACTGGACTGA
AATGACAACACCATGCTCCCACTTCTAGTTGCACTGCTCATGGCATCTAAAGGACAGGCTCAGG
ATCAGCAAGTTCTGTGTGGCCACAGACCTGCCTTCCCGAACTCATCGTGGCTGCCGTTGAGGGA
GCTGCTTGAAGTCCAGAATGGTGAATTCCCATGGCAAATTAGAACTGGTAGCAGTGAACATCAC
TGTGGTCCTGGGAATCAAGACTTTCAGCGACATCAACTTGGAGAGAAAACTAGTACAGAAGATC
ATCACTCACAAAGACTACAAGCCACCCCACCTTGACAGCGACCTTTGCCTGCTCCTCCTTGCCA
CGCCAATCGAATTCAACAAAGTCAAAATGCCCATCTGCCTGCCACAGAGGGAGAGCACCTGGGA
CAGGTGCTGGATGGCAGAGTGGGCATACGCCCATGGCCATGGTTCAGCCAAAGGCTTAAACATG
CACCTTAAGAAGCTGAGGGTGGTTCAGATTAGCTGGAGGACATGTGCCAAGAGGGTGACTCAGC
TCTCCAGGAACATGCTTTGTGCCTGGAAGGAAGCAGGCACCAACGGCAAGTGCCAGGGAGACAG
CGGGGCACCCATGGTCTGTGCTAACTGGGAGACTCGGAGGCTCTTTCAAGTGGGTGTCTTCAGC
TGGGGCGTAACTTCAGGATCCAGGGGAAGGCCCGGCATGTTTGTGTCTGTGGCTCAGTTTATCC
CATGGATCCTGGAGGAGACACAAAGAGAGGGACGAGCCCTCACCCTCTCAAAAGCCTCAAAAAG
TTTCTTGGCTTGCGGTCCACACTACCATCCCATATTGCTAAGCTTGGGTTCTCAAATACTGCTT
GCTGTCATGTTTGCTGGGGATAAATCAAATTACTAAGCTCTGACTC

hide sequence

RefSeq Acc Id:

XM_017599903 ⟹ XP_017455392

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	47,453,206 - 47,459,554 (+)	NCBI

Sequence:

show sequence

TGATATCCCAGGACTGAGAGCAGATAGGGCAGTTCTCAGTAAGACAGGGGGCACATCCTGAAGC
TGGCTATTTTGTCAGTGTGAAGCTATCAATAATTAAGATCTTGGAATGCTGATGAGAAAGACTG
ATGATGTGGAGAGGTTCTGTGTGGCCACAGACCTGCCTTCCCGAACTCATCGTGGCTGCCGTTG
AGGGAGCTGCTTGAAGTCCAGAATGGTGAATTCCCATGGCAAATTAGAACTGGTAGCAGTGAAC
ATCACTGTGGTCCTGGGAATCAAGACTTTCAGCGACATCAACTTGGAGAGAAAACTAGTACAGA
AGATCATCACTCACAAAGACTACAAGCCACCCCACCTTGACAGCGACCTTTGCCTGCTCCTCCT
TGCCACGCCAATCGAATTCAACAAAGTCAAAATGCCCATCTGCCTGCCACAGAGGGAGAGCACC
TGGGACAGGTGCTGGATGGCAGAGTGGGCATACGCCCATGGCCATGGTTCAGCCAAAGGCTTAA
ACATGCACCTTAAGAAGCTGAGGGTGGTTCAGATTAGCTGGAGGACATGTGCCAAGAGGGTGAC
TCAGCTCTCCAGGAACATGCTTTGTGCCTGGAAGGAAGCAGGCACCAACGGCAAGTGCCAGGGA
GACAGCGGGGCACCCATGGTCTGTGCTAACTGGGAGACTCGGAGGCTCTTTCAAGTGGGTGTCT
TCAGCTGGGGCGTAACTTCAGGATCCAGGGGAAGGCCCGGCATGTTTGTGTCTGTGGCTCAGTT
TATCCCATGGATCCTGGAGGAGACACAAAGAGAGGGACGAGCCCTCACCCTCTCAAAAGCCTCA
AAAAGTTTCTTGGCTTGCGGTCCACACTACCATCCCATATTGCTAAGCTTGGGTTCTCAAATAC
TGCTTGCTGTCATGTTTGCTGGGGATAAATCAAATTACTAAGCTCTGACTC

hide sequence

RefSeq Acc Id:

XM_017604927 ⟹ XP_017460416

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Celera	15	38,011,914 - 38,018,219 (+)	NCBI

Sequence:

show sequence

CACTTGTAGGGGCATCTTTCCACAACCAGAGACCAAGTAATAATCAAGGCAGTTCTCTTTGACC
AAGCACCTGGAACCTTGATGAAAGAGAGAGGCTTCTAGAATGCTGAGGAACTTTGCGTACACCA
CTGTTTCTGAGGCAGATGCTTCTTTCCTTTTGCCACTGTGCATTCCATTGATATCACAGGACTG
AGAGCAGATAGGGCAGTTCTCAGTAAGACAGGGGGCACATCCTGAAGCTGCTTATTTTGTCAGT
GTGAAGCTATCAATAATTAAGATCTTGGAATGCTGATGAGAAAGATGATGATGTGGAGAGGTTC
TGTGTGGCCACAGACCTGCCTTCCCGAACTCATCGTGGCTGCCGTTGAGGGAGCTGCTTGAAGT
CCAGAATGGTGAATTCCCATGGCAAATTAGAACTGGTAGCAGTGAACATCACTGTGGTCCTGGG
AATCAAGACTTTCAGCGACATCAACTTGGAGAGAAAACTAGTACAGAAGATCATCACTCACAAA
GACTACAAGCCACCCCACCTTGACAGCGACCTTTGCCTGCTCCTCCTTGCCACGCCAATCGAAT
TCAACAAAGTCAAAATGCCCATCTGCCTGCCACAGAGGGAGAGCACCTGGGACAGGTGCTGGAT
GGCAGAGTGGGCATACGCCCATGGCCATGGTTCAGCCAAAGGCTTAAACATGCACCTTAAGAAG
CTGAGGGTGGTTCAGATTAGCTGGAGGACATGTGCCAAGAGGGTGACTCAGCTCTCCAGGAACA
TGCTTTGTGCCTGGAAGGAAGCAGGCACCAACGGCAAGTGCCAGGGAGACAGCGGGGCACCCAT
GGTCTGTGCTAACTGGGAGACTCGGAGGCTCTTTCAAGTGGGTGTCTTCAGCTGGGGCGTAACT
TCAGGATCCAGGGGAAGGCCCGGCATGTTTGTGTCTGTGGCTCAGTTTATCCCATGGATCCTGG
AGGAGACACAAAGAGAGGGACGAGCCCTCACCCTCTCAAAAGCCTCAAAAAGTTTCTTGGCTTG
CGGTCCACACTACCATCCCATATTGCTAAGCTTGGGTTCTCAAATACTGCTTGCTGTCATGTTT
GCTGGGGATAAATCAAATTACTAAGCTCTGACTC

hide sequence

Protein Sequences

Protein RefSeqs	XP_003751550	(Get FASTA)	NCBI Sequence Viewer
	XP_003752873	(Get FASTA)	NCBI Sequence Viewer
	XP_017455392	(Get FASTA)	NCBI Sequence Viewer
	XP_017460416	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_003751550 ⟸ XM_003751502

- UniProtKB:

M0R4Y2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVNSHGKLELVAVNITVVLGIKTFSDINLERKLVQKIITHKDYKPPHLDSDLCLLLLATPIEFN
KVKMPICLPQRESTWDRCWMAEWAYAHGHGSAKGLNMHLKKLRVVQISWRTCAKRVTQLSRNML
CAWKEAGTNGKCQGDSGAPMVCANWETRRLFQVGVFSWGVTSGSRGRPGMFVSVAQFIPWILEE
TQREGRALTLSKASKSFLACGPHYHPILLSLGSQILLAVMFAGDKSNY

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RefSeq Acc Id:

XP_003752873 ⟸ XM_003752825

- UniProtKB:

M0R4Y2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVNSHGKLELVAVNITVVLGIKTFSDINLERKLVQKIITHKDYKPPHLDSDLCLLLLATPIEFN
KVKMPICLPQRESTWDRCWMAEWAYAHGHGSAKGLNMHLKKLRVVQISWRTCAKRVTQLSRNML
CAWKEAGTNGKCQGDSGAPMVCANWETRRLFQVGVFSWGVTSGSRGRPGMFVSVAQFIPWILEE
TQREGRALTLSKASKSFLACGPHYHPILLSLGSQILLAVMFAGDKSNY

hide sequence

RefSeq Acc Id:

XP_017460416 ⟸ XM_017604927

- UniProtKB:

M0R4Y2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVNSHGKLELVAVNITVVLGIKTFSDINLERKLVQKIITHKDYKPPHLDSDLCLLLLATPIEFN
KVKMPICLPQRESTWDRCWMAEWAYAHGHGSAKGLNMHLKKLRVVQISWRTCAKRVTQLSRNML
CAWKEAGTNGKCQGDSGAPMVCANWETRRLFQVGVFSWGVTSGSRGRPGMFVSVAQFIPWILEE
TQREGRALTLSKASKSFLACGPHYHPILLSLGSQILLAVMFAGDKSNY

hide sequence

RefSeq Acc Id:

XP_017455392 ⟸ XM_017599903

- UniProtKB:

M0R4Y2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVNSHGKLELVAVNITVVLGIKTFSDINLERKLVQKIITHKDYKPPHLDSDLCLLLLATPIEFN
KVKMPICLPQRESTWDRCWMAEWAYAHGHGSAKGLNMHLKKLRVVQISWRTCAKRVTQLSRNML
CAWKEAGTNGKCQGDSGAPMVCANWETRRLFQVGVFSWGVTSGSRGRPGMFVSVAQFIPWILEE
TQREGRALTLSKASKSFLACGPHYHPILLSLGSQILLAVMFAGDKSNY

hide sequence

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699786

Promoter ID:

EPDNEW_R10307

Type:

initiation region

Name:

LOC100910401_1

Description:

serine protease 55-like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	47,455,750 - 47,455,810	EPDNEW

Strain Variation

Strain Sequence Variants (Rnor 6.0)

ACI/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

ACI/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

ACI/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

BBDP/Wor (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

BN/SsN (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Buf/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

COP/CrCrl (MCW & UW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob) University of Wisconsin (Dr. James Shull)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Charles River Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob) and UW Madison (Dr. James Shull)

F344/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

F344/NRrrc (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

FHH/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHH/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

FHL/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHL/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

GH/OmrMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

GK/Ox (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LE/Stm (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/Crl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/NCrlBR (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LH/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LL/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LN/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

M520/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

MHS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MNS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MR/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

SBH/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBH/Ygl sequenced by MCW

SBH/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SBN/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBN/Ygl sequenced by MCW

SBN/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHR/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHRSP/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SR/JrHsd (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Harlan Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SR/JrHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/Jr (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/JrHsdMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SS/JrHsdMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WAG/Rij (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

WKY/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WN/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Damaging Variants

Assembly: Rnor_5.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain
15	51213692	51213693	A	G	snv	COP/CrCrl (MCW & UW), F344/Jcl (KyushuU), WKY/Gcrc (KNAW), DA/BklArbNsi (KNAW), LE/OrlBarth (UDEL), F344/NSlc (KyushuU), SR/JrHsd (KNAW), SS/Jr (KNAW), WKY/N (KNAW), LEC/Tj (KyushuU), BDIX/NemOda (KyushuU), SR/JrHsd (MCW), F344/NCrl (KNAW), SDLEF7/Barth (UDEL), LH/MavRrrc (KNAW), SHRSP/Gcrc (KNAW), BDIX.Cg-Tal/NemOda (KyushuU), WKY/NCrl (KNAW), F344/Stm (KyushuU), SS/JrHsdMcwi (MCW), LN/MavRrrc (KNAW), ACI/N (KNAW), F344/NHsd (KNAW), LL/MavRrrc (KNAW), ACI/EurMcwi (KNAW), F344/NRrrc (Illumina) (KNAW), F344/NRrrc (SOLiD) (KNAW), WN/N (KNAW), ACI/EurMcwi (MCW), SS/JrHsdMcwi (KNAW), WKY/NHsd (KNAW), Crl:SD (UDEL), F344/DuCrlCrlj (KyushuU), MR/N (KNAW)

Assembly: Rnor_6.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain
15	47457895	47457896	A	G	snv	SS/JrHsdMcwi (MCW), SS/Jr (RGD), ACI/EurMcwi (MCW), CDR, F344/NCrl (RGD), WKY/Gcrc (RGD), WKY/NHsd (RGD), COP/CrCrl (MCW & UW), SHRSP/Gcrc (RGD), SR/JrHsd (RGD), SR/JrHsd (MCW), LL/MavRrrc (RGD), WKY/NCrl (RGD), LN/MavRrrc (RGD), SS/JrHsdMcwi (RGD), LH/MavRrrc (RGD), ACI/EurMcwi (RGD)

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:6498506	AgrOrtholog
Ensembl Genes	ENSRNOG00000047637	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000064434	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000075276	ENTREZGENE, UniProtKB/TrEMBL
InterPro	Peptidase_S1	UniProtKB/TrEMBL
	Trypsin-like_Pept_dom	UniProtKB/TrEMBL
KEGG Report	rno:100910401	UniProtKB/TrEMBL
NCBI Gene	LOC100910401	ENTREZGENE
Pfam	Trypsin	UniProtKB/TrEMBL
PhenoGen	Prss51	PhenoGen
PROSITE	TRYPSIN_DOM	UniProtKB/TrEMBL
SMART	Tryp_SPc	UniProtKB/TrEMBL
Superfamily-SCOP	Pept_Ser_Cys	UniProtKB/TrEMBL
UniProt	M0R4Y2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-09-05	Prss51	serine protease 51	LOC100910401	serine protease 55-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-05	LOC100910401	serine protease 55-like			Symbol and Name status set to provisional	70820	PROVISIONAL

More on Prss51
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	JBrowse: rn5 rn6
	NCBI Genome Data Viewer

CRRD Object Information
CRRD ID:	6498506
Created:	2012-07-05
Species:	Rattus norvegicus
Last Modified:	2019-11-27
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.