Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: LOC100910107 (ubiquitin carboxyl-terminal hydrolase DUB-1-like) Rattus norvegicus
Analyze
Symbol: LOC100910107
Name: ubiquitin carboxyl-terminal hydrolase DUB-1-like
Description: Predicted to have cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. Predicted to be involved in several processes, including proteolysis; regulation of GTPase activity; and regulation of defense response to virus. Predicted to localize to cytosol; endoplasmic reticulum membrane; and nucleus. Orthologous to human USP17L2 (ubiquitin specific peptidase 17 like family member 2); INTERACTS WITH 2-hydroxypropanoic acid (ortholog); butanal (ortholog); cadmium atom (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: ubiquitin carboxyl-terminal hydrolase 17-like protein A
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01169,720,247 - 169,721,788 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1169,720,253 - 169,721,758 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,856,225 - 175,857,588 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1156,977,121 - 156,978,662 (-)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on LOC100910107
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6500127
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.