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Gene: LOC100909797 (RT1 class I histocompatibility antigen, AA alpha chain-like) Rattus norvegicus
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Symbol: LOC100909797
Name: RT1 class I histocompatibility antigen, AA alpha chain-like
Description: Predicted to have peptide antigen binding activity and signaling receptor binding activity. Predicted to be involved in several processes, including antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent; positive regulation of leukocyte mediated cytotoxicity; and response to bacterium. Predicted to localize to the MHC class Ib protein complex; external side of plasma membrane; and extracellular space; INTERACTS WITH flavonoids; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,242,236 - 3,253,995 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0205,340,515 - 5,348,199 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera20160,982 - 168,811 (+)NCBICelera
Cytogenetic Map20 NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC100909797
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6501562
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.