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Gene: Trnat-agu (transfer RNA threonine (anticodon AGU)) Rattus norvegicus
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Symbol: Trnat-agu
Name: transfer RNA threonine (anticodon AGU)
Description: This record serves to anchor the annotation of tRNAs of this class on the rat genome. The placement is predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).[provided by RefSeq, May 2010]
Type: trna
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0191,486,515 - 91,486,588 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01055,618,144 - 55,618,217 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01055,697,046 - 55,697,119 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01055,645,036 - 55,645,109 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01744,534,669 - 44,534,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01745,559,035 - 45,559,108 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01743,919,322 - 43,919,395 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01757,911,865 - 57,911,938 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01745,774,114 - 45,774,187 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01758,935,816 - 58,935,889 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01055,388,147 - 55,388,220 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01055,440,106 - 55,440,179 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01055,360,947 - 55,361,020 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0192,616,999 - 92,617,072 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1741,303,396 - 41,303,469 (-)NCBICelera
Celera1752,995,280 - 52,995,353 (-)NCBICelera
Celera1753,968,574 - 53,968,647 (-)NCBICelera
Celera1753,776,191 - 53,776,264 (+)NCBICelera
Celera1052,929,689 - 52,929,762 (-)NCBICelera
Celera1052,980,995 - 52,981,068 (+)NCBICelera
Celera1052,902,804 - 52,902,877 (+)NCBICelera
Celera182,233,482 - 82,233,555 (-)NCBICelera
Cytogenetic Map1 NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Genomics

Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trnat-agu
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6576114
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.