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Gene: Trnak-cuu (transfer RNA lysine (anticodon CUU)) Rattus norvegicus
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Symbol: Trnak-cuu
Name: transfer RNA lysine (anticodon CUU)
Description: This record serves to anchor the annotation of tRNAs of this class on the rat genome. The placement is predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).[provided by RefSeq, May 2010]
Type: trna
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01271,647,641 - 271,647,713 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0910,681,363 - 10,681,435 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01271,565,594 - 271,565,666 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01268,204,746 - 268,204,818 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01267,917,405 - 267,917,477 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01012,876,099 - 12,876,171 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01034,182,169 - 34,182,241 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01012,861,168 - 12,861,240 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01012,854,342 - 12,854,414 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01012,852,738 - 12,852,810 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01714,460,122 - 14,460,194 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.02141,888,434 - 141,888,506 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.02198,567,936 - 198,568,008 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.02198,636,994 - 198,637,066 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.02198,630,130 - 198,630,202 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0693,417,550 - 93,417,622 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.07107,036,125 - 107,036,197 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07106,980,542 - 106,980,614 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.099,673,098 - 9,673,170 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06102,863,393 - 102,863,465 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02218,117,039 - 218,117,111 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02218,123,928 - 218,124,000 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02218,055,783 - 218,055,855 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02161,575,674 - 161,575,746 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01716,522,086 - 16,522,158 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01012,674,035 - 12,674,107 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01012,675,639 - 12,675,711 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01012,682,465 - 12,682,537 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01033,965,866 - 33,965,938 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01012,697,396 - 12,697,468 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01275,347,435 - 275,347,507 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01275,642,372 - 275,642,444 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01279,075,322 - 279,075,394 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01278,993,635 - 278,993,707 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,298,940 - 7,299,012 (+)NCBICelera
Celera1243,068,075 - 243,068,147 (-)NCBICelera
Celera794,603,916 - 94,603,988 (+)NCBICelera
Celera687,960,373 - 87,960,445 (-)NCBICelera
Celera2176,573,061 - 176,573,133 (-)NCBICelera
Celera2176,510,016 - 176,510,088 (+)NCBICelera
Celera2131,251,165 - 131,251,237 (+)NCBICelera
Celera1714,350,752 - 14,350,824 (+)NCBICelera
Celera1012,256,449 - 12,256,521 (-)NCBICelera
Celera1012,258,053 - 12,258,125 (-)NCBICelera
Celera1012,264,744 - 12,264,816 (-)NCBICelera
Celera1032,587,820 - 32,587,892 (-)NCBICelera
Celera1012,279,391 - 12,279,463 (+)NCBICelera
Celera1242,789,943 - 242,790,015 (-)NCBICelera
Celera890,217,050 - 90,217,122 (-)NCBICelera
Cytogenetic Map1 NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Genomics

Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trnak-cuu
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 6576126
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.