Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Hsf2 (heat shock transcription factor 2) Rattus norvegicus
Analyze
Symbol: Hsf2
Name: heat shock transcription factor 2
CRRD ID: 68395
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II and spermatogenesis. Predicted to localize to cytoplasm and nucleoplasm. Orthologous to human HSF2 (heat shock transcription factor 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; allethrin; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: heat shock factor 2; heat shock factor protein 2; heat shock transcription factor hsf2
Orthologs:
Homo sapiens (human) : HSF2 (heat shock transcription factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Hsf2 (heat shock factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hsf2 (heat shock transcription factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : HSF2 (heat shock transcription factor 2)
Canis lupus familiaris (dog) : HSF2 (heat shock transcription factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hsf2 (heat shock transcription factor 2)
Sus scrofa (pig) : HSF2 (heat shock transcription factor 2)
Chlorocebus sabaeus (African green monkey) : HSF2 (heat shock transcription factor 2)
Heterocephalus glaber (naked mole-rat) : Hsf2 (heat shock transcription factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02038,935,820 - 38,963,444 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2038,935,820 - 38,963,309 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02040,673,635 - 40,701,259 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42036,520,685 - 36,538,506 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12036,534,484 - 36,552,286 (+)NCBI
Celera2038,134,605 - 38,162,082 (+)NCBICelera
Cytogenetic Map20q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Hsf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 68395
Created: 2001-07-11
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.