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Gene: Syt4 (synaptotagmin 4) Rattus norvegicus
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Symbol: Syt4
Name: synaptotagmin 4
Description: Exhibits several functions, including phosphatidylserine binding activity; protein dimerization activity; and syntaxin binding activity. Involved in several processes, including negative regulation of transport; secretory granule maturation; and vesicle fusion with vesicle. Localizes to several cellular components, including the Golgi apparatus; astrocyte projection; and cytoplasmic vesicle. Biomarker of visual epilepsy. Orthologous to human SYT4 (synaptotagmin 4); INTERACTS WITH ammonium chloride; bisphenol A; clozapine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: synaptotagmin IV; synaptotagmin-4; sytIV
Orthologs:
Homo sapiens (human) : SYT4 (synaptotagmin 4)  HGNC  Alliance
Mus musculus (house mouse) : Syt4 (synaptotagmin IV)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syt4 (synaptotagmin 4)
Pan paniscus (bonobo/pygmy chimpanzee) : SYT4 (synaptotagmin 4)
Canis lupus familiaris (dog) : SYT4 (synaptotagmin 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syt4 (synaptotagmin 4)
Sus scrofa (pig) : SYT4 (synaptotagmin 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01824,172,580 - 24,181,989 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01823,893,019 - 23,902,428 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41823,805,080 - 23,814,489 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11823,833,130 - 23,841,087 (-)NCBI
Celera1822,798,742 - 22,808,151 (-)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Syt4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 68397
Created: 2001-07-11
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.