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Gene: Stx5 (syntaxin 5) Rattus norvegicus
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Symbol: Stx5
Name: syntaxin 5
Description: Predicted to have SNAP receptor activity; SNARE binding activity; and protein N-terminus binding activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport and vesicle fusion with Golgi apparatus. Localizes to the Golgi membrane; SNARE complex; and endoplasmic reticulum. Orthologous to human STX5 (syntaxin 5); INTERACTS WITH 2-methoxyethanol; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC156622; Stx5a; syntaxin 5a; syntaxin-5
Orthologs:
Homo sapiens (human) : STX5 (syntaxin 5)  HGNC  Alliance
Mus musculus (house mouse) : Stx5a (syntaxin 5A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stx5 (syntaxin 5)
Pan paniscus (bonobo/pygmy chimpanzee) : STX5 (syntaxin 5)
Canis lupus familiaris (dog) : STX5 (syntaxin 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stx5 (syntaxin 5)
Sus scrofa (pig) : STX5 (syntaxin 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01224,939,497 - 224,955,658 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01231,876,955 - 231,893,830 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41211,409,653 - 211,426,725 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11211,568,082 - 211,585,155 (+)NCBI
Celera1203,150,296 - 203,166,494 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Stx5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 68426
Created: 2001-07-11
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.