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Gene: Atrn (attractin) Rattus norvegicus
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Symbol: Atrn
Name: attractin
Description: Predicted to have signaling receptor activity. Involved in pigmentation and response to oxidative stress. Localizes to the cytoplasm and plasma membrane. Orthologous to human ATRN (attractin); PARTICIPATES IN melanocortin system pathway; INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: membrane attractin; protein zitter
Orthologs:
Homo sapiens (human) : ATRN (attractin)  HGNC  Alliance
Mus musculus (house mouse) : Atrn (attractin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atrn (attractin)
Pan paniscus (bonobo/pygmy chimpanzee) : ATRN (attractin)
Canis lupus familiaris (dog) : ATRN (attractin)
Sus scrofa (pig) : ATRN (attractin)
more info ...
Is Marker For: Strains:   ZI/Kyo   ZIMY/Kyo   MV/Opu   SER/Kyo   W-Tg(RNB1-116K03-EGFP-mRFP)41Kyo   W-Tg(RNB1-116K03-EGFP-mRFP)104Kyo   W-Tg(RNB1-116K03-EGFP-mRFP)3Kyo   W-Tg(RNB1-116K03-EGFP-mRFP)20Kyo   W-Tg(RNB1-116K03-EGFP-mRFP)21Kyo   W-Tg(RNB1-116K03-EGFP-mRFP)22Kyo  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03123,434,409 - 123,567,922 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3123,434,409 - 123,567,918 (+)Ensembl
Rnor_5.03129,934,303 - 130,067,267 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43118,539,268 - 118,701,177 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13118,444,840 - 118,606,746 (+)NCBI
Celera3116,920,666 - 117,054,199 (+)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atrn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 69063
Created: 2001-11-08
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.