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Gene: Smpx (small muscle protein, X-linked) Rattus norvegicus
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Symbol: Smpx
Name: small muscle protein, X-linked
Description: Predicted to localize to the muscle tendon junction; myofibril; and nucleus. Human ortholog(s) of this gene implicated in X-linked nonsyndromic deafness. Orthologous to human SMPX (small muscle protein X-linked); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; alpha-hexachlorocyclohexane; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: small muscular protein; stretch-responsive skeletal muscle protein
Orthologs:
Homo sapiens (human) : SMPX (small muscle protein X-linked)  HGNC  Alliance
Mus musculus (house mouse) : Smpx (small muscle protein, X-linked)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smpx (small muscle protein X-linked)
Pan paniscus (bonobo/pygmy chimpanzee) : SMPX (small muscle protein, X-linked)
Canis lupus familiaris (dog) : SMPX (small muscle protein X-linked)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smpx (small muscle protein X-linked)
Sus scrofa (pig) : SMPX (small muscle protein X-linked)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X40,029,200 - 40,086,870 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX40,030,248 - 40,086,870 (-)Ensembl
Rnor_5.0X40,340,762 - 40,397,380 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X58,521,059 - 58,581,070 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X58,574,529 - 58,634,539 (-)NCBI
CeleraX37,866,028 - 37,923,593 (-)NCBICelera
Cytogenetic MapXq21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Smpx
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 69233
Created: 2001-11-14
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.