Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Sema6b (semaphorin 6B) Rattus norvegicus
Symbol: Sema6b
Name: semaphorin 6B
CRRD ID: 69278
Description: Predicted to have chemorepellent activity and semaphorin receptor binding activity. Predicted to be involved in several processes, including generation of neurons; neural crest cell migration; and semaphorin-plexin signaling pathway. Predicted to localize to extracellular space and integral component of plasma membrane. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy. Orthologous to human SEMA6B (semaphorin 6B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: sema domain transmembrane domain (TM) and cytoplasmic domain (semaphorin) 6B; sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B; sema Z; semaphorin-6B; semaphorin-Z
Homo sapiens (human) : SEMA6B (semaphorin 6B)  HGNC  Alliance
Mus musculus (house mouse) : Sema6b (sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema6b (semaphorin 6B)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA6B (semaphorin 6B)
Canis lupus familiaris (dog) : SEMA6B (semaphorin 6B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sema6b (semaphorin 6B)
Sus scrofa (pig) : SEMA6B (semaphorin 6B)
Chlorocebus sabaeus (African green monkey) : SEMA6B (semaphorin 6B)
Heterocephalus glaber (naked mole-rat) : Sema6b (semaphorin 6B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0910,934,273 - 10,951,252 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,941,613 - 10,951,252 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,921,231 - 9,938,199 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,547,095 - 7,556,706 (+)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Sema6b
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 69278
Created: 2001-11-14
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.