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Gene: Sema6b (semaphorin 6B) Rattus norvegicus
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Symbol: Sema6b
Name: semaphorin 6B
Description: Predicted to have chemorepellent activity and semaphorin receptor binding activity. Predicted to be involved in several processes, including negative regulation of axon extension involved in axon guidance; neural crest cell migration; and semaphorin-plexin signaling pathway. Predicted to localize to the extracellular space and integral component of plasma membrane. Orthologous to human SEMA6B (semaphorin 6B); INTERACTS WITH (RS)-amphetamine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: sema domain transmembrane domain (TM) and cytoplasmic domain (semaphorin) 6B; sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B; sema Z; semaphorin-6B; semaphorin-Z
Orthologs:
Homo sapiens (human) : SEMA6B (semaphorin 6B)  HGNC  Alliance
Mus musculus (house mouse) : Sema6b (sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema6b (semaphorin 6B)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA6B (semaphorin 6B)
Canis lupus familiaris (dog) : SEMA6B (semaphorin 6B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sema6b (semaphorin 6B)
Sus scrofa (pig) : SEMA6B (semaphorin 6B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0910,934,273 - 10,951,252 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.099,921,231 - 9,938,199 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,547,095 - 7,556,706 (+)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Sema6b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 69278
Created: 2001-11-14
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.