Gene: Sox11 (SRY box 11) Rattus norvegicus
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Symbol: Sox11
Name: SRY box 11
Description: Exhibits DNA-binding transcription activator activity, RNA polymerase II-specific, transcription coactivator activity, and transcription regulatory region sequence-specific DNA binding activity; involved in several processes, including cell population proliferation, kidney development, and nervous system development; localizes to the nucleus; orthologous to human SOX11 (SRY-box 11); INTERACTS WITH 6-propyl-2-thiouracil; alachlor; amitriptyline.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: SRY (sex determining region Y)-box 11; SRY-box 11; SRY-box containing gene 11; transcription factor SOX-11
Orthologs:
Homo sapiens (human) : SOX11 (SRY-box 11)  HGNC  Alliance
Mus musculus (house mouse) : Sox11 (SRY (sex determining region Y)-box 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sox11 (SRY-box 11)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX11 (SRY-box 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox11 (SRY-box 11)
Sus scrofa (pig) : SOX11 (SRY-box 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0646,629,967 - 46,631,988 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0655,343,067 - 55,345,088 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4645,141,366 - 45,143,387 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1645,144,498 - 45,146,513 (-)NCBI
Celera643,252,857 - 43,254,878 (-)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Sox11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 69351
Created: 2001-11-14
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.