Gene: Sycp2 (synaptonemal complex protein 2) Rattus norvegicus
Analyze
Symbol: Sycp2
Name: synaptonemal complex protein 2
Description: Predicted to have protein heterodimerization activity. Predicted to be involved in several processes, including fertilization; male genitalia morphogenesis; and meiotic nuclear division. Localizes to the lateral element. Orthologous to human SYCP2 (synaptonemal complex protein 2); INTERACTS WITH (RS)-amphetamine; 2-ethoxyethanol; 2-methoxyethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: rnSCP2; SCP-2; synaptonemal complex lateral element protein
Orthologs:
Homo sapiens (human) : SYCP2 (synaptonemal complex protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Sycp2 (synaptonemal complex protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sycp2 (synaptonemal complex protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SYCP2 (synaptonemal complex protein 2)
Canis lupus familiaris (dog) : SYCP2 (synaptonemal complex protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sycp2 (synaptonemal complex protein 2)
Sus scrofa (pig) : SYCP2 (synaptonemal complex protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03173,884,559 - 173,948,304 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03183,144,181 - 183,206,650 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43167,437,522 - 167,502,083 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13167,343,557 - 167,408,119 (-)NCBI
Celera3167,063,122 - 167,125,089 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Sycp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 69429
Created: 2001-11-27
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.