Gene: Kdm3a (lysine demethylase 3A) Rattus norvegicus
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Symbol: Kdm3a
Name: lysine demethylase 3A
Description: Predicted to have several functions, including DNA-binding transcription factor activity, androgen receptor binding activity, and nucleic acid binding activity; involved in male gonad development, positive regulation of gene expression, and response to hypoxia; predicted to localize to the chromatin, cytoplasm, and nucleoplasm; orthologous to human KDM3A (lysine demethylase 3A); PARTICIPATES IN histone modification pathway; INTERACTS WITH 3H-1,2-dithiole-3-thione; 6-propyl-2-thiouracil; allethrin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: jmjC domain-containing histone demethylation protein 2A; Jmjd1; Jmjd1a; jumonji domain containing 1; jumonji domain containing 1A; jumonji domain-containing protein 1A; LOC312440; lysine (K)-specific demethylase 3A; lysine-specific demethylase 3A; probable zinc finger protein; testis-specific gene A protein; zinc finger protein TSGA
Orthologs:
Homo sapiens (human) : KDM3A (lysine demethylase 3A)  HGNC  Alliance
Mus musculus (house mouse) : Kdm3a (lysine (K)-specific demethylase 3A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm3a (lysine demethylase 3A)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM3A (lysine demethylase 3A)
Canis lupus familiaris (dog) : KDM3A (lysine demethylase 3A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm3a (lysine demethylase 3A)
Sus scrofa (pig) : KDM3A (lysine demethylase 3A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0499,503,160 - 99,547,315 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04164,282,422 - 164,326,579 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44104,866,501 - 104,911,355 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14105,110,981 - 105,155,233 (-)NCBI
Celera492,789,151 - 92,833,037 (-)NCBICelera
Cytogenetic Map4q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Kdm3a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708351
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.