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Gene: Clcc1 (chloride channel CLIC-like 1) Rattus norvegicus
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Symbol: Clcc1
Name: chloride channel CLIC-like 1
Description: Exhibits chloride channel activity. Involved in chloride transport. Localizes to the cytoplasm and nucleus. Colocalizes with the Golgi apparatus and endoplasmic reticulum. Orthologous to human CLCC1 (chloride channel CLIC like 1); INTERACTS WITH 2,6-dinitrotoluene; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chloride channel CLIC-like protein 1; LOC170927; Mclc; Mid-1-related chloride channel 1; mid-1-related chloride channel protein 1
Orthologs:
Homo sapiens (human) : CLCC1 (chloride channel CLIC like 1)  HGNC  Alliance
Mus musculus (house mouse) : Clcc1 (chloride channel CLIC-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clcc1 (chloride channel CLIC like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CLCC1 (chloride channel CLIC like 1)
Canis lupus familiaris (dog) : CLCC1 (chloride channel CLIC like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcc1 (chloride channel CLIC like 1)
Sus scrofa (pig) : CLCC1 (chloride channel CLIC like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02211,450,426 - 211,479,885 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02230,923,372 - 230,952,836 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42204,245,357 - 204,278,530 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12204,208,110 - 204,241,283 (+)NCBI
Celera2188,943,040 - 188,970,221 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clcc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708359
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.