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Gene: Synpr (synaptoporin) Rattus norvegicus
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Symbol: Synpr
Name: synaptoporin
Description: Predicted to have syntaxin-1 binding activity. Localizes to the integral component of synaptic vesicle membrane. Orthologous to human SYNPR (synaptoporin); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC66030; synaptorin
Orthologs:
Homo sapiens (human) : SYNPR (synaptoporin)  HGNC  Alliance
Mus musculus (house mouse) : Synpr (synaptoporin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Synpr (synaptoporin)
Pan paniscus (bonobo/pygmy chimpanzee) : SYNPR (synaptoporin)
Canis lupus familiaris (dog) : SYNPR (synaptoporin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Synpr (synaptoporin)
Sus scrofa (pig) : SYNPR (synaptoporin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01514,558,613 - 14,885,790 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01518,562,041 - 18,889,455 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41513,135,331 - 13,314,004 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11513,135,330 - 13,314,004 (-)NCBI
Celera1511,575,871 - 11,752,702 (-)NCBICelera
Cytogenetic Map15p16-p15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Synpr
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708366
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.