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Gene: Carhsp1 (calcium regulated heat stable protein 1) Rattus norvegicus
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Symbol: Carhsp1
Name: calcium regulated heat stable protein 1
Description: Predicted to have mRNA 3'-UTR binding activity. Predicted to be involved in regulation of mRNA stability. Localizes to the cytoplasm. Predicted to colocalize with the cytoplasmic exosome (RNase complex). Orthologous to human CARHSP1 (calcium regulated heat stable protein 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: calcium-regulated heat stable protein 1; calcium-regulated heat-stable protein (24kD); calcium-regulated heat-stable protein of 24 kDa; Crhsp-24; Crhsp24
Orthologs:
Homo sapiens (human) : CARHSP1 (calcium regulated heat stable protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Carhsp1 (calcium regulated heat stable protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Carhsp1 (calcium regulated heat stable protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CARHSP1 (calcium regulated heat stable protein 1)
Canis lupus familiaris (dog) : CARHSP1 (calcium regulated heat stable protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Carhsp1 (calcium regulated heat stable protein 1)
Sus scrofa (pig) : CARHSP1 (calcium regulated heat stable protein 1)
Chlorocebus sabaeus (African green monkey) : CARHSP1 (calcium regulated heat stable protein 1)
Heterocephalus glaber (naked mole-rat) : Carhsp1 (calcium regulated heat stable protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0107,041,510 - 7,055,107 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl107,041,510 - 7,055,101 (+)Ensembl
Rnor_5.0105,842,867 - 5,856,464 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4106,986,583 - 7,000,181 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1106,986,582 - 7,000,180 (+)NCBI
Celera105,942,335 - 5,955,930 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Carhsp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708415
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.