Gene: Havcr1 (hepatitis A virus cellular receptor 1) Rattus norvegicus
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Symbol: Havcr1
Name: hepatitis A virus cellular receptor 1
Description: Predicted to have phosphatidylserine binding activity and virus receptor activity; involved in several processes, including phagocytosis, engulfment, response to antibiotic, and response to drug; localizes to several cellular components, including the apical plasma membrane, cell surface, and extracellular space; biomarker of colitis, hypertension, kidney failure (multiple), and proteinuria (multiple); orthologous to human HAVCR1 (hepatitis A virus cellular receptor 1); INTERACTS WITH 1-naphthyl isothiocyanate; 11-deoxycorticosterone; 2,4,6-trinitrobenzenesulfonic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: HAVcr-1; hepatitis A virus cellular receptor 1 homolog; kidney injury molecule 1; KIM-1; Kim1; t cell immunoglobulin and mucin domain-containing protein 1; TIMD-1
Orthologs:
Homo sapiens (human) : HAVCR1 (hepatitis A virus cellular receptor 1)  HGNC  Alliance
Mus musculus (house mouse) : Havcr1 (hepatitis A virus cellular receptor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Havcr1 (hepatitis A virus cellular receptor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : HAVCR1 (hepatitis A virus cellular receptor 1)
Canis lupus familiaris (dog) : HAVCR1 (hepatitis A virus cellular receptor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Havcr1 (hepatitis A virus cellular receptor 1)
Sus scrofa (pig) : HAVCR1 (hepatitis A virus cellular receptor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01031,813,819 - 31,860,934 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01031,632,718 - 31,682,172 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41031,834,519 - 31,858,019 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11031,835,567 - 31,859,066 (+)NCBI
Celera1030,573,361 - 30,596,533 (+)NCBICelera
Cytogenetic Map10q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Havcr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708425
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.