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Gene: Cltrn (collectrin, amino acid transport regulator) Rattus norvegicus
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Symbol: Cltrn
Name: collectrin, amino acid transport regulator
Description: Predicted to have protein homodimerization activity. Predicted to be involved in positive regulation of transport. Predicted to localize to the brush border membrane and cytoplasm. Orthologous to human CLTRN (collectrin, amino acid transport regulator); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol 3-benzoate; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: collectrin; kidney-specific membrane protein; MGC93468; NX-17; Nx17; Tmem27; transmembrane protein 27
Orthologs:
Homo sapiens (human) : CLTRN (collectrin, amino acid transport regulator)  HGNC  Alliance
Mus musculus (house mouse) : Cltrn (collectrin, amino acid transport regulator)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cltrn (collectrin, amino acid transport regulator)
Pan paniscus (bonobo/pygmy chimpanzee) : CLTRN (collectrin, amino acid transport regulator)
Canis lupus familiaris (dog) : CLTRN (collectrin, amino acid transport regulator)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cltrn (collectrin, amino acid transport regulator)
Sus scrofa (pig) : CLTRN (collectrin, amino acid transport regulator)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X32,118,082 - 32,153,687 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X32,490,603 - 32,522,780 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X51,118,665 - 51,149,768 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X51,172,133 - 51,203,237 (-)NCBI
CeleraX30,705,756 - 30,738,867 (-)NCBICelera
Cytogenetic MapXq14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cltrn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708489
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.