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Gene: Stx17 (syntaxin 17) Rattus norvegicus
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Symbol: Stx17
Name: syntaxin 17
Description: Exhibits SNARE binding activity and protein kinase binding activity. Predicted to be involved in several processes, including endoplasmic reticulum-Golgi intermediate compartment organization; macroautophagy; and vesicle docking. Localizes to the cytoplasm. Predicted to colocalize with the HOPS complex. Orthologous to human STX17 (syntaxin 17); INTERACTS WITH (RS)-amphetamine; 1,3-dinitrobenzene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC252853; syntaxin-17
Orthologs:
Homo sapiens (human) : STX17 (syntaxin 17)  HGNC  Alliance
Mus musculus (house mouse) : Stx17 (syntaxin 17)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stx17 (syntaxin 17)
Pan paniscus (bonobo/pygmy chimpanzee) : STX17 (syntaxin 17)
Canis lupus familiaris (dog) : STX17 (syntaxin 17)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stx17 (syntaxin 17)
Sus scrofa (pig) : STX17 (syntaxin 17)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0563,866,346 - 63,926,276 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0568,383,379 - 68,443,631 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4564,798,013 - 64,854,400 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1564,803,051 - 64,859,439 (+)NCBI
Celera565,092,596 - 65,149,083 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Stx17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708499
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.