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Gene: Slc1a5 (solute carrier family 1 member 5) Rattus norvegicus
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Symbol: Slc1a5
Name: solute carrier family 1 member 5
Description: Exhibits L-aspartate transmembrane transporter activity and L-serine transmembrane transporter activity. Involved in amino acid transport. Predicted to localize to basal plasma membrane and integral component of membrane. Orthologous to human SLC1A5 (solute carrier family 1 member 5); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 3,3',4,4',5-pentachlorobiphenyl.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Asct2; CAZ-associated structural protein; H4-ASCT2; H4-system ASC-like transporter; neutral amino acid transporter B(0); Slc1a7; sodium-dependent neutral amino acid transporter ASCT2; solute carrier family 1 (neutral amino acid transporter), member 5; solute carrier family 1, member 7
Orthologs:
Homo sapiens (human) : SLC1A5 (solute carrier family 1 member 5)  HGNC  Alliance
Mus musculus (house mouse) : Slc1a5 (solute carrier family 1 (neutral amino acid transporter), member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc1a5 (solute carrier family 1 member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC1A5 (solute carrier family 1 member 5)
Canis lupus familiaris (dog) : SLC1A5 (solute carrier family 1 member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc1a5 (solute carrier family 1 member 5)
Sus scrofa (pig) : SLC1A5 (solute carrier family 1 member 5)
Chlorocebus sabaeus (African green monkey) : SLC1A5 (solute carrier family 1 member 5)
Heterocephalus glaber (naked mole-rat) : Slc1a5 (solute carrier family 1 member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0178,710,686 - 78,724,789 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,710,539 - 78,724,794 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0179,957,648 - 79,971,751 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4177,111,082 - 77,125,166 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1177,189,192 - 77,203,276 (+)NCBI
Celera171,941,916 - 71,956,019 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc1a5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708512
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.