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Gene: Stxbp5 (syntaxin binding protein 5) Rattus norvegicus
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Symbol: Stxbp5
Name: syntaxin binding protein 5
Description: Exhibits syntaxin-1 binding activity. Involved in synaptic vesicle cycle. Localizes to several cellular components, including the Schaffer collateral - CA1 synapse; extrinsic component of presynaptic membrane; and presynaptic cytosol. Orthologous to human STXBP5 (syntaxin binding protein 5); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: lethal(2) giant larvae protein homolog 3; syntaxin binding protein 5 (tomosyn); syntaxin-binding protein 5; tomosyn; tomosyn-1
Orthologs:
Homo sapiens (human) : STXBP5 (syntaxin binding protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Stxbp5 (syntaxin binding protein 5 (tomosyn))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stxbp5 (syntaxin binding protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : STXBP5 (syntaxin binding protein 5)
Canis lupus familiaris (dog) : STXBP5 (syntaxin binding protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stxbp5 (syntaxin binding protein 5)
Sus scrofa (pig) : STXBP5 (syntaxin binding protein 5)
Chlorocebus sabaeus (African green monkey) : STXBP5 (syntaxin binding protein 5)
Heterocephalus glaber (naked mole-rat) : Stxbp5 (syntaxin binding protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013,858,917 - 4,011,684 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13,858,909 - 4,011,511 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.015,532,156 - 5,682,250 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414,428,182 - 4,579,373 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.114,428,181 - 4,579,373 (-)NCBI
Celera12,725,757 - 2,875,514 (-)NCBICelera
Cytogenetic Map1p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Stxbp5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708517
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.