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Gene: Slc27a5 (solute carrier family 27 member 5) Rattus norvegicus
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Symbol: Slc27a5
Name: solute carrier family 27 member 5
Description: Exhibits cholate-CoA ligase activity. Involved in bile acid metabolic process. Localizes to the intracellular membrane-bounded organelle and protein-containing complex. Orthologous to human SLC27A5 (solute carrier family 27 member 5); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: BA-CoA ligase; BACS; BAL; bile acid CoA ligase; bile acid-CoA ligase; bile acyl-CoA synthetase; cholate--CoA ligase; FATP-5; fatty acid transport protein 5; LOC79111; rBAL-1; solute carrier family 27 (fatty acid transporter), member 5; very long-chain acyl-CoA synthetase-related protein; VLACS-related; VLACSR
Orthologs:
Homo sapiens (human) : SLC27A5 (solute carrier family 27 member 5)  HGNC  Alliance
Mus musculus (house mouse) : Slc27a5 (solute carrier family 27 (fatty acid transporter), member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc27a5 (solute carrier family 27 member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC27A5 (solute carrier family 27 member 5)
Canis lupus familiaris (dog) : LOC608675 (bile acyl-CoA synthetase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc27a5 (solute carrier family 27 member 5)
Sus scrofa (pig) : SLC27A5 (solute carrier family 27 member 5)
Chlorocebus sabaeus (African green monkey) : SLC27A5 (solute carrier family 27 member 5)
Heterocephalus glaber (naked mole-rat) : Slc27a5 (solute carrier family 27 member 5)
more info ...
Allele / Splice: Slc27a5m1Mcwi   Slc27a5m2Mcwi  
Genetic Models: FHH-Slc27a5m1Mcwi BN-Slc27a5m2Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0165,576,599 - 65,587,192 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl165,576,535 - 65,587,186 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0166,387,832 - 66,398,425 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4172,924,630 - 72,935,223 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1173,002,740 - 73,013,332 (+)NCBI
Celera160,212,177 - 60,222,770 (+)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc27a5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708535
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.