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Gene: Nlrp6 (NLR family, pyrin domain containing 6) Rattus norvegicus
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Symbol: Nlrp6
Name: NLR family, pyrin domain containing 6
Description: Exhibits peptide binding activity and vasopressin receptor activity. Predicted to be involved in several processes, including negative regulation of inflammatory response to antigenic stimulus; negative regulation of signal transduction; and regulation of mucus secretion. Predicted to localize to inflammasome complex; nuclear membrane; and plasma membrane. Orthologous to human NLRP6 (NLR family pyrin domain containing 6); INTERACTS WITH ammonium chloride; bisphenol A; gentamycin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: angiotensin II/vasopressin receptor; angiotensin/vasopressin receptor; Avr; dual angiotensin II/vasopressin receptor; LOC100912017; LOC171390; NACHT, leucine rich repeat and PYD containing 6; NACHT, LRR and PYD domains-containing protein 6; NACHT, LRR and PYD domains-containing protein 6-like; Nalp6; Navr; Navr/Avr; non-angiotensin-vasopressin receptor; Non-AVR; PYRIN-containing APAF1-like protein 5-like
Orthologs:
Homo sapiens (human) : NLRP6 (NLR family pyrin domain containing 6)  HGNC  Alliance
Mus musculus (house mouse) : Nlrp6 (NLR family, pyrin domain containing 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nlrp6 (NLR family pyrin domain containing 6)
Pan paniscus (bonobo/pygmy chimpanzee) : NLRP6 (NLR family pyrin domain containing 6)
Canis lupus familiaris (dog) : NLRP6 (NLR family pyrin domain containing 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nlrp6 (NLR family pyrin domain containing 6)
Sus scrofa (pig) : NLRP6 (NLR family pyrin domain containing 6)
Chlorocebus sabaeus (African green monkey) : NLRP6 (NLR family pyrin domain containing 6)
Heterocephalus glaber (naked mole-rat) : Nlrp6 (NLR family pyrin domain containing 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01213,676,954 - 213,683,114 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1213,686,046 - 213,691,943 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01220,602,488 - 220,609,150 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41201,085,759 - 201,091,919 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11201,237,866 - 201,242,386 (+)NCBI
Celera1193,648,293 - 193,654,453 (+)NCBICelera
Cytogenetic Map1q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nlrp6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 708549
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.