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Gene: Ykt6 (YKT6 v-SNARE homolog) Rattus norvegicus
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Symbol: Ykt6
Name: YKT6 v-SNARE homolog
Description: Predicted to have SNAP receptor activity and protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; retrograde transport, endosome to Golgi; and vesicle docking involved in exocytosis. Localizes to the SNARE complex; dendrite; and neuronal cell body. Orthologous to human YKT6 (YKT6 v-SNARE homolog); INTERACTS WITH ammonium chloride; bisphenol A; ethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: prenylated SNARE protein; synaptobrevin homolog YKT6; YKT6 homolog; YKT6 homolog (S. Cerevisiae); YKT6 v-SNARE homolog (S. cerevisiae)
Orthologs:
Homo sapiens (human) : YKT6 (YKT6 v-SNARE homolog)  HGNC  Alliance
Mus musculus (house mouse) : Ykt6 (YKT6 v-SNARE homolog (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ykt6 (YKT6 v-SNARE homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : YKT6 (YKT6 v-SNARE homolog)
Canis lupus familiaris (dog) : LOC475497 (synaptobrevin homolog YKT6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ykt6 (YKT6 v-SNARE homolog)
Sus scrofa (pig) : YKT6 (YKT6 v-SNARE homolog)
Chlorocebus sabaeus (African green monkey) : YKT6 (YKT6 v-SNARE homolog)
Heterocephalus glaber (naked mole-rat) : Ykt6 (YKT6 v-SNARE homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01486,196,018 - 86,207,057 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,195,892 - 86,205,712 (+)Ensembl
Rnor_5.01486,880,204 - 86,889,524 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41486,619,828 - 86,629,148 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11486,638,972 - 86,648,293 (+)NCBI
Celera1479,716,098 - 79,725,418 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ykt6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 70897
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.